SNP Profiles matching POUND 12 /A

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	CC	CC	GG	CT	GG	AC	CG	AA	CT	GG	GG	AA	CC
1._POUND_4_/A	_	_	CC	GG	CT	_	AC	CG	AA	CT	_	_	AA	_
2._GC-08-186-4-29	TT	CC	CC	GG	CT	GG	_	CG	AA	CT	GG	GG	AA	CC
3._GC-08-186-4-29	TT	CC	CC	GG	CT	GG	_	CG	AA	CT	GG	GG	AA	CC
4._GC-08-186-4-29	TT	CC	CC	GG	CT	GG	_	CG	AA	CT	GG	GG	AA	CC
5._NA	TT	CC	CC	GG	TT	GG	AA	CG	AA	CT	GG	GG	AA	CC
6._GC-08-186-4-29	TT	CC	CC	GG	CT	GG	AA	CG	AA	CT	GG	GG	AA	CC
7._HUALLAGA_39	_	_	CC	GG	TT	_	AA	CG	AA	CT	_	_	AA	_

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	AC	CC	GG	CC	AC	CT	CC	CT	AG	TT	AC	CG	CG
1._POUND_4_/A	AA	AC	CC	GG	CG	AC	_	CC	_	_	_	_	CG	_
2._GC-08-186-4-29	AA	AC	CC	GG	_	AC	CC	CC	CT	GG	TT	AC	CC	CG
3._GC-08-186-4-29	AA	AC	CC	GG	_	AC	CC	CC	CT	GG	TT	AC	CC	CG
4._GC-08-186-4-29	_	AC	CC	GG	_	AC	CC	CC	CT	GG	TT	AC	CC	CG
5._NA	AA	AC	CC	GG	_	AC	CC	CC	CT	AG	TT	AC	GG	GG
6._GC-08-186-4-29	AA	AC	CC	GG	_	AC	CC	CC	CT	GG	TT	AC	CC	CG
7._HUALLAGA_39	AA	AC	CC	GG	_	AC	_	CC	_	_	_	_	GG	_

	29	30	31	32	33	34	35	36	37	38	39	40	41
_Input profile	TT	AA	CC	CC	GG	GG	TT	GT	TT	CC	TT	GG	AG	X_X
1._POUND_4_/A	TT	AA	_	CC	_	_	_	GT	_	_	TT	GG	AG	X_X
2._GC-08-186-4-29	TT	AA	CC	CC	GG	GG	TT	GT	TT	CC	TT	GG	GG	X_X
3._GC-08-186-4-29	TT	AA	CC	CC	GG	GG	TT	GT	TT	CC	TT	GG	GG	X_X
4._GC-08-186-4-29	TT	AA	CC	CC	GG	GG	TT	GT	TT	CC	TT	GG	GG	X_X
5._NA	TT	AA	CC	CC	GG	GG	TT	GT	TT	CC	TT	GG	AG	X_X
6._GC-08-186-4-29	TT	AA	CC	CC	GG	GG	TT	GT	TT	CC	TT	GG	GG	X_X
7._HUALLAGA_39	TT	AA	_	CC	_	_	_	GT	_	_	TT	GG	AG	X_X

Input profile: POUND_12_/A RUQ_1458

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

1._POUND_4_/A

97.8 %
23 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 6B F411 T15

Dapeng Zhang, 2016

2._U_17_[PER] GC-08-186-4-29

94.9 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

Mars, 2018

3._U_17_[PER] GC-08-186-4-29

94.9 %
39 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

Mars, 2018

4._U_17_[PER] GC-08-186-4-29

94.7 %
38 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

Mars, 2018

5._HUALLAGA_39 NA

93.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

Mars, 2018

6._U_17_[PER] GC-08-186-4-29

93.8 %
40 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 10

Notes: 10

Mars, 2018

7._HUALLAGA_39

93.2 %
22 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8916 2

Dapeng Zhang, 2016

Key to SNP Markers

1	TcSNP75	2	TcSNP90	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP174	7	TcSNP193	8	TcSNP226	9	TcSNP230	10	TcSNP242
11	TcSNP329	12	TcSNP364	13	TcSNP372	14	TcSNP448	15	TcSNP469
16	TcSNP529	17	TcSNP534	18	TcSNP560	19	TcSNP577	20	TcSNP591
21	TcSNP602	22	TcSNP619	23	TcSNP702	24	TcSNP731	25	TcSNP799
26	TcSNP823	27	TcSNP872	28	TcSNP878	29	TcSNP891	30	TcSNP998
31	TcSNP999	32	TcSNP1060	33	TcSNP1063	34	TcSNP1111	35	TcSNP1126
36	TcSNP1253	37	TcSNP1309	38	TcSNP1439	39	TcSNP1442	40	TcSNP1458
41	TcSNP1484

SNP Profiles matching POUND 12 /A

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Input profile: POUND_12_/A RUQ_1458

1._POUND_4_/A

97.8 % 23 shared markers

2._U_17_[PER] GC-08-186-4-29

94.9 % 39 shared markers

3._U_17_[PER] GC-08-186-4-29

94.9 % 39 shared markers

4._U_17_[PER] GC-08-186-4-29

94.7 % 38 shared markers

5._HUALLAGA_39 NA

93.8 % 40 shared markers

6._U_17_[PER] GC-08-186-4-29

93.8 % 40 shared markers

7._HUALLAGA_39

93.2 % 22 shared markers

97.8 %
23 shared markers

94.9 %
39 shared markers

94.9 %
39 shared markers

94.7 %
38 shared markers

93.8 %
40 shared markers

93.8 %
40 shared markers

93.2 %
22 shared markers